Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nuclear transport factor 2 family proteinSGRAN_RS02335Not AvailablePositive492505 - 49295416952.5
iclr family transcriptional regulatorSGRAN_RS02340Not AvailablePositive493169 - 49400832213.0
smp-30/gluconolactonase/lre family proteinSGRAN_RS02345Not AvailablePositive494102 - 49496830443.1
sdr family nad(p)-dependent oxidoreductaseSGRAN_RS02350Not AvailableNegative494973 - 49573425999.3
enoyl-coa hydratase/isomerase family proteinSGRAN_RS02355Not AvailablePositive495993 - 49675727164.8
amp-binding proteinSGRAN_RS02360Not AvailablePositive496770 - 49835356674.8
nad(p)/fad-dependent oxidoreductaseSGRAN_RS02365Not AvailablePositive498471 - 50009359990.1
hypothetical proteinSGRAN_RS02370Not AvailableNegative500302 - 50061611770.6
hypothetical proteinSGRAN_RS22065Not AvailableNegative500750 - 50112714054.7
rhs repeat-associated core domain-containing proteinSGRAN_RS02375Not AvailableNegative501128 - 505327149262.0

Displaying genes 521 – 530 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.