Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nuclear transport factor 2 family proteinSGRAN_RS02285Not AvailableNegative482239 - 48268817148.7
sdr family nad(p)-dependent oxidoreductaseSGRAN_RS02290Not AvailableNegative482704 - 48363632824.7
duf3237 domain-containing proteinSGRAN_RS02295Not AvailableNegative483709 - 48417917410.6
mfs transporterSGRAN_RS02300Not AvailablePositive484403 - 48573746255.2
nadh:flavin oxidoreductaseSGRAN_RS02305Not AvailablePositive485752 - 48684640112.6
amidohydrolase family proteinSGRAN_RS02310Not AvailablePositive486884 - 48770830762.7
sdr family nad(p)-dependent oxidoreductaseSGRAN_RS02315Not AvailablePositive487695 - 48844425970.3
hypothetical proteinSGRAN_RS02320Not AvailablePositive488567 - 48899815492.8
carboxymuconolactone decarboxylase family proteinSGRAN_RS02325Not AvailableNegative489064 - 48940811416.7
tonb-dependent receptorSGRAN_RS22495Not AvailablePositive489694 - 49242397987.1

Displaying genes 511 – 520 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.