Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abgt family transporter | SGRAN_RS02235 | Not Available | Positive | 469525 - 471063 | 54055.7 |
| coce/nond family hydrolase | SGRAN_RS02240 | Not Available | Positive | 471060 - 472892 | 67165.9 |
| lysr family transcriptional regulator | SGRAN_RS02245 | Not Available | Positive | 472895 - 473848 | 34562.8 |
| long-chain fatty acid--coa ligase | SGRAN_RS02250 | Not Available | Negative | 473967 - 475625 | 60095.2 |
| acyl-coa dehydrogenase family protein | SGRAN_RS02255 | Not Available | Positive | 475807 - 476985 | 43392.8 |
| acyl-coa dehydrogenase family protein | SGRAN_RS02260 | Not Available | Positive | 476999 - 478114 | 39296.0 |
| rhodanese-like domain-containing protein | SGRAN_RS02265 | Not Available | Negative | 478180 - 479751 | 56873.3 |
| hypothetical protein | SGRAN_RS02270 | Not Available | Negative | 479748 - 480335 | 21621.3 |
| glutathione s-transferase family protein | SGRAN_RS02275 | Not Available | Positive | 480500 - 481105 | 22725.4 |
| yeih family protein | SGRAN_RS02280 | Not Available | Negative | 481124 - 482161 | 35008.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.