Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carboxymuconolactone decarboxylase family proteinSGRAN_RS02185Not AvailableNegative456587 - 45723424070.5
nuclear transport factor 2 family proteinSGRAN_RS02190Not AvailableNegative457245 - 45764314853.6
mfs transporterSGRAN_RS02195Not AvailableNegative457673 - 45899246362.6
sdr family nad(p)-dependent oxidoreductaseSGRAN_RS02200Not AvailablePositive459099 - 45986926565.9
tonb-dependent receptorSGRAN_RS02205Not AvailableNegative460035 - 46223079609.4
duf3237 domain-containing proteinSGRAN_RS02210Not AvailablePositive462350 - 46285317789.1
caib/baif coa-transferase family proteinSGRAN_RS02215Not AvailableNegative463039 - 46420541239.3
hydroxymethylglutaryl-coa lyaseSGRAN_RS02220Not AvailablePositive464343 - 46525731098.4
capa family proteinSGRAN_RS02225Not AvailableNegative465270 - 46641540310.1
tonb-dependent receptorSGRAN_RS02230Not AvailablePositive466571 - 469462101392.0

Displaying genes 491 – 500 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.