Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
long-chain-fatty-acid--coa ligaseSGRAN_RS02135Not AvailablePositive445463 - 44709758621.8
alpha/beta hydrolaseSGRAN_RS02140Not AvailablePositive447174 - 44830141650.1
phosphotransferase family proteinSGRAN_RS02145Not AvailablePositive448302 - 44928234849.9
phosphopyruvate hydrataseSGRAN_RS02150Not AvailablePositive449279 - 45057744855.9
nad(p)-dependent oxidoreductaseSGRAN_RS02155Not AvailablePositive450574 - 45149432074.0
alpha/beta fold hydrolaseSGRAN_RS02160Not AvailablePositive451551 - 45224325211.4
cobalamin-independent methionine synthase ii family proteinSGRAN_RS02165Not AvailableNegative452295 - 45334738165.5
long-chain-fatty-acid--coa ligaseSGRAN_RS02170Not AvailablePositive453432 - 45499755719.3
voc family proteinSGRAN_RS02175Not AvailableNegative455203 - 45584123367.3
glutathione s-transferase family proteinSGRAN_RS02180Not AvailableNegative455872 - 45648922359.0

Displaying genes 481 – 490 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.