Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sodium:proton antiporterSGRAN_RS01985Not AvailableNegative406644 - 40846164942.3
tonb-dependent receptorSGRAN_RS01990Not AvailableNegative408554 - 41128697115.5
tonb-dependent receptorSGRAN_RS01995Not AvailableNegative411514 - 414366101345.0
ligase-associated dna damage response endonuclease pdemSGRAN_RS02000Not AvailableNegative414536 - 41526125751.8
retroviral-like aspartic protease family proteinSGRAN_RS02005Not AvailableNegative415321 - 41636737272.3
ligase-associated dna damage response dexh box helicaseSGRAN_RS02010Not AvailableNegative416450 - 41885587762.8
srpbcc domain-containing proteinSGRAN_RS02015Not AvailableNegative419242 - 41971217717.0
helix-turn-helix transcriptional regulatorSGRAN_RS02020Not AvailableNegative419709 - 42003811949.3
voc family proteinSGRAN_RS02025Not AvailableNegative420035 - 42050817192.7
septal ring lytic transglycosylase rlpa family proteinSGRAN_RS02030Not AvailableNegative420686 - 42108413734.1

Displaying genes 451 – 460 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.