Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
assimilatory sulfite reductase (nadph) flavoprotein subunitSGRAN_RS01935Not AvailablePositive394408 - 39623765069.0
nadph-dependent assimilatory sulfite reductase hemoprotein subunitSGRAN_RS01940Not AvailablePositive396249 - 39796763549.0
mfs transporterSGRAN_RS01945Not AvailableNegative397993 - 39933648265.2
yggs family pyridoxal phosphate-dependent enzymeSGRAN_RS01950Not AvailableNegative399368 - 40003023312.0
thiamine phosphate synthaseSGRAN_RS01955Not AvailablePositive400093 - 40074923453.7
hypothetical proteinSGRAN_RS01960Not AvailableNegative400722 - 40135122715.7
duf3576 domain-containing proteinSGRAN_RS01965Not AvailablePositive401691 - 40215516345.7
leucine--trna ligaseSGRAN_RS01970Not AvailablePositive402206 - 40477093945.8
lps assembly lipoprotein lpteSGRAN_RS01975Not AvailablePositive404904 - 40544918713.2
dna polymerase iii subunit deltaSGRAN_RS01980Not AvailablePositive405456 - 40648735967.6

Displaying genes 441 – 450 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.