Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | SGRAN_RS21150 | Not Available | Negative | 4632545 - 4633696 | 39607.1 |
| tolc family protein | SGRAN_RS21155 | Not Available | Negative | 4633699 - 4634964 | 43810.0 |
| arsenical resistance protein arsh | SGRAN_RS21160 | Not Available | Negative | 4635761 - 4636504 | 27688.3 |
| acr3 family arsenite efflux transporter | SGRAN_RS21165 | Not Available | Negative | 4636508 - 4637578 | 38977.1 |
| arsenate reductase (glutaredoxin) | SGRAN_RS21170 | Not Available | Negative | 4637578 - 4638003 | 15370.8 |
| helix-turn-helix transcriptional regulator | SGRAN_RS21175 | Not Available | Negative | 4638015 - 4638344 | 11743.3 |
| ardc family protein | SGRAN_RS21180 | Not Available | Positive | 4638678 - 4639637 | 35108.0 |
| parb/repb/spo0j family partition protein | SGRAN_RS21185 | Not Available | Positive | 4639766 - 4641928 | 78249.5 |
| hypothetical protein | SGRAN_RS21190 | Not Available | Positive | 4642035 - 4642535 | 18013.7 |
| duf7007 domain-containing protein | SGRAN_RS21195 | Not Available | Positive | 4642547 - 4643167 | 23011.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.