Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSGRAN_RS21105Not AvailablePositive4622709 - 462326021470.1
cation diffusion facilitator family transporterSGRAN_RS21110Not AvailablePositive4623245 - 462418333532.3
zf-tfiib domain-containing proteinSGRAN_RS21975Not AvailablePositive4624245 - 462452010469.4
srpbcc domain-containing proteinSGRAN_RS21120Not AvailablePositive4624566 - 462504818677.8
hypothetical proteinSGRAN_RS21125Not AvailablePositive4625241 - 462564814343.3
helix-turn-helix domain-containing proteinSGRAN_RS21980Not AvailableNegative4626498 - 462691115234.5
mercuric transporter mert family proteinSGRAN_RS21130Not AvailablePositive4626988 - 462738314238.4
heavy-metal-associated domain-containing proteinSGRAN_RS21985Not AvailablePositive4627396 - 462772511187.5
mercury(ii) reductaseSGRAN_RS21140Not AvailablePositive4627764 - 462922150349.7
efflux rnd transporter permease subunitSGRAN_RS21145Not AvailableNegative4629327 - 4632542114797.0

Displaying genes 4341 – 4350 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.