Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf885 family proteinSGRAN_RS20865Not AvailableNegative4565665 - 456742866232.5
plp-dependent cysteine synthase family proteinSGRAN_RS20870Not AvailableNegative4567578 - 456861236158.5
lrp/asnc family transcriptional regulatorSGRAN_RS20875Not AvailablePositive4568731 - 456918916999.6
methionine biosynthesis protein metwSGRAN_RS20880Not AvailableNegative4569383 - 456997021440.7
homoserine o-acetyltransferaseSGRAN_RS20885Not AvailableNegative4569973 - 457109139869.4
histidinol-phosphate transaminaseSGRAN_RS20890Not AvailablePositive4571171 - 457228639704.0
prephenate/arogenate dehydrogenase family proteinSGRAN_RS20895Not AvailablePositive4572292 - 457320031529.6
hypothetical proteinSGRAN_RS20900Not AvailableNegative4573292 - 457363312446.6
1-acyl-sn-glycerol-3-phosphate acyltransferaseSGRAN_RS20905Not AvailableNegative4573718 - 457444326779.9
ydcf family proteinSGRAN_RS20910Not AvailableNegative4574440 - 457497019607.1

Displaying genes 4291 – 4300 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.