Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | SGRAN_RS01835 | Not Available | Positive | 376877 - 377824 | 32468.1 |
| riboflavin synthase | SGRAN_RS01840 | Not Available | Positive | 377832 - 378458 | 21501.5 |
| mmcb family dna repair protein | SGRAN_RS01845 | Not Available | Negative | 378747 - 379229 | 17435.1 |
| single-stranded dna-binding protein | SGRAN_RS01850 | Not Available | Negative | 379258 - 379812 | 18604.4 |
| ferrous iron transporter b | SGRAN_RS01855 | Not Available | Negative | 379845 - 381719 | 66443.9 |
| feoa family protein | SGRAN_RS01860 | Not Available | Negative | 381716 - 381967 | 9234.41 |
| coq9 family protein | SGRAN_RS01865 | Not Available | Negative | 382021 - 382704 | 24876.9 |
| dmt family transporter | SGRAN_RS01870 | Not Available | Negative | 382704 - 383618 | 32153.7 |
| alkene reductase | SGRAN_RS01875 | Not Available | Positive | 383732 - 384817 | 38445.4 |
| hypothetical protein | SGRAN_RS01880 | Not Available | Negative | 384864 - 385472 | 21273.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.