Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SGRAN_RS20470 | Not Available | Positive | 4483195 - 4483425 | 8009.63 |
| 3-hydroxyisobutyrate dehydrogenase | SGRAN_RS20475 | Not Available | Negative | 4483700 - 4484590 | 29803.8 |
| enoyl-coa hydratase-related protein | SGRAN_RS20480 | Not Available | Negative | 4484731 - 4485513 | 27948.9 |
| enoyl-coa hydratase/isomerase family protein | SGRAN_RS20485 | Not Available | Negative | 4485611 - 4486657 | 37643.2 |
| acyl-coa dehydrogenase family protein | SGRAN_RS20490 | Not Available | Negative | 4486654 - 4487799 | 41115.2 |
| giy-yig nuclease family protein | SGRAN_RS20495 | Not Available | Negative | 4487849 - 4488157 | 11938.5 |
| i78 family peptidase inhibitor | SGRAN_RS20500 | Not Available | Negative | 4488284 - 4488583 | 10287.3 |
| hypothetical protein | SGRAN_RS20505 | Not Available | Negative | 4488612 - 4489184 | 19434.0 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | SGRAN_RS20510 | Not Available | Negative | 4489249 - 4490742 | 52983.3 |
| lysr family transcriptional regulator | SGRAN_RS20515 | Not Available | Positive | 4490842 - 4491726 | 31565.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.