Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | SGRAN_RS20420 | Not Available | Positive | 4470597 - 4471469 | 29349.9 |
| mfs transporter | SGRAN_RS20425 | Not Available | Positive | 4471466 - 4472890 | 52131.9 |
| mfs transporter | SGRAN_RS20430 | Not Available | Positive | 4472887 - 4474326 | 51331.4 |
| acyl-coa dehydrogenase family protein | SGRAN_RS20435 | Not Available | Positive | 4474440 - 4475732 | 47675.1 |
| zn-dependent alcohol dehydrogenase | SGRAN_RS20440 | Not Available | Positive | 4475847 - 4476938 | 37632.0 |
| phosphotransferase family protein | SGRAN_RS20445 | Not Available | Positive | 4476982 - 4478055 | 39575.9 |
| sdr family nad(p)-dependent oxidoreductase | SGRAN_RS20450 | Not Available | Positive | 4478052 - 4478825 | 26278.5 |
| sdr family nad(p)-dependent oxidoreductase | SGRAN_RS20455 | Not Available | Positive | 4478828 - 4479631 | 26788.2 |
| serine hydrolase | SGRAN_RS20460 | Not Available | Positive | 4479644 - 4480846 | 43599.3 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | SGRAN_RS20465 | Not Available | Positive | 4480870 - 4482903 | 72715.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.