Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SGRAN_RS22425 | Not Available | Positive | 4384044 - 4384562 | 18153.9 |
| hypothetical protein | SGRAN_RS22730 | Not Available | Positive | 4384805 - 4384963 | 5425.61 |
| molybdopterin-binding protein | SGRAN_RS20040 | Not Available | Negative | 4384936 - 4385694 | 26555.8 |
| glutathione s-transferase family protein | SGRAN_RS20045 | Not Available | Positive | 4385763 - 4386398 | 22718.1 |
| bax inhibitor-1/ycca family protein | SGRAN_RS20050 | Not Available | Negative | 4386475 - 4387203 | 25877.2 |
| rna 2',3'-cyclic phosphodiesterase | SGRAN_RS20055 | Not Available | Positive | 4387375 - 4387917 | 19656.7 |
| low molecular weight protein-tyrosine-phosphatase | SGRAN_RS20060 | Not Available | Negative | 4387899 - 4388372 | 16680.8 |
| mfs transporter | SGRAN_RS20065 | Not Available | Positive | 4388491 - 4390089 | 55579.2 |
| superoxide dismutase family protein | SGRAN_RS20070 | Not Available | Negative | 4390289 - 4390858 | 19351.8 |
| udp-glucose/gdp-mannose dehydrogenase family protein | SGRAN_RS20075 | Not Available | Negative | 4390926 - 4392236 | 46380.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.