Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2269 domain-containing protein | SGRAN_RS01740 | Not Available | Positive | 359054 - 359530 | 17490.6 |
| lrp/asnc family transcriptional regulator | SGRAN_RS01745 | Not Available | Negative | 359535 - 360020 | 18255.1 |
| hypothetical protein | SGRAN_RS22490 | Not Available | Positive | 360172 - 360333 | 5857.03 |
| response regulator | SGRAN_RS01750 | Not Available | Negative | 360553 - 360915 | 12865.6 |
| duf3572 family protein | SGRAN_RS22875 | Not Available | Positive | 361003 - 361275 | 9357.11 |
| hypothetical protein | SGRAN_RS01760 | Not Available | Positive | 361272 - 361904 | 22767.6 |
| rida family protein | SGRAN_RS01765 | Not Available | Positive | 361931 - 362395 | 15855.2 |
| gnat family n-acetyltransferase | SGRAN_RS01770 | Not Available | Positive | 362404 - 363552 | 41374.1 |
| sel1-like repeat protein | SGRAN_RS01775 | Not Available | Negative | 363827 - 364141 | 11289.1 |
| pantoate--beta-alanine ligase | SGRAN_RS01780 | Not Available | Negative | 364391 - 365230 | 29386.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.