Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SGRAN_RS19845 | Not Available | Positive | 4332005 - 4332574 | 19966.1 |
| hypothetical protein | SGRAN_RS19850 | Not Available | Positive | 4332760 - 4333227 | 16685.0 |
| hemolysin family protein | SGRAN_RS19855 | Not Available | Negative | 4333277 - 4334599 | 47506.1 |
| ompa family protein | SGRAN_RS19860 | Not Available | Positive | 4334817 - 4335506 | 24407.8 |
| marc family protein | SGRAN_RS19865 | Not Available | Negative | 4335561 - 4336190 | 22204.2 |
| hypothetical protein | SGRAN_RS19870 | Not Available | Negative | 4336187 - 4336867 | 23955.3 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | SGRAN_RS19875 | Not Available | Negative | 4336867 - 4337766 | 30347.0 |
| yggt family protein | SGRAN_RS19880 | Not Available | Negative | 4337766 - 4338065 | 11418.5 |
| acetylglutamate kinase | SGRAN_RS19885 | Not Available | Negative | 4338111 - 4339019 | 31251.1 |
| queuosine precursor transporter | SGRAN_RS19890 | Not Available | Negative | 4339016 - 4339690 | 23383.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.