Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acylaseSGRAN_RS19790Not AvailableNegative4316334 - 431849078531.1
atp-dependent chaperone clpbSGRAN_RS19795Not AvailablePositive4318937 - 432151693546.3
hypothetical proteinSGRAN_RS19800Not AvailableNegative4321638 - 43218808832.5
aspartyl/asparaginyl beta-hydroxylase domain-containing proteinSGRAN_RS19805Not AvailableNegative4321941 - 432311943449.8
hypothetical proteinSGRAN_RS19810Not AvailablePositive4323196 - 432423637365.2
tonb-dependent receptorSGRAN_RS19820Not AvailableNegative4324575 - 4327589105958.0
m23 family metallopeptidaseSGRAN_RS19825Not AvailableNegative4327858 - 432879932482.8
duf2093 domain-containing proteinSGRAN_RS19830Not AvailableNegative4328796 - 43290087485.03
exodeoxyribonuclease vii large subunitSGRAN_RS19835Not AvailableNegative4329085 - 433053951452.0
phosphoribosylamine--glycine ligaseSGRAN_RS19840Not AvailablePositive4330538 - 433181543326.5

Displaying genes 4071 – 4080 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.