Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mipa/ompv family proteinSGRAN_RS21945Not AvailablePositive4285346 - 428637136355.1
nad(p)/fad-dependent oxidoreductaseSGRAN_RS19695Not AvailablePositive4287018 - 428858358372.9
phosphomethylpyrimidine synthase thicSGRAN_RS19700Not AvailablePositive4288780 - 429067269545.2
atp-dependent endonucleaseSGRAN_RS19705Not AvailableNegative4290713 - 429239563436.0
2'-5' rna ligase family proteinSGRAN_RS19710Not AvailablePositive4292598 - 429311018804.8
arylamine n-acetyltransferaseSGRAN_RS19715Not AvailableNegative4293213 - 429410031799.5
glycine zipper 2tm domain-containing proteinSGRAN_RS19720Not AvailablePositive4294277 - 429465713054.4
hypothetical proteinSGRAN_RS19725Not AvailablePositive4294876 - 429546319839.3
osmc family proteinSGRAN_RS19730Not AvailableNegative4295474 - 429590514669.2
duf2061 domain-containing proteinSGRAN_RS19735Not AvailableNegative4295918 - 42961728971.24

Displaying genes 4051 – 4060 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.