Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SGRAN_RS19385 | Not Available | Negative | 4222693 - 4222890 | 6816.24 |
| scp2 domain-containing protein | SGRAN_RS19390 | Not Available | Positive | 4223027 - 4223479 | 16972.5 |
| peptidase u32 family protein | SGRAN_RS19395 | Not Available | Positive | 4223476 - 4224477 | 35687.6 |
| u32 family peptidase | SGRAN_RS19400 | Not Available | Positive | 4224483 - 4225409 | 33743.3 |
| cyclic nucleotide-binding domain-containing protein | SGRAN_RS19405 | Not Available | Positive | 4225572 - 4226294 | 26408.8 |
| adenosylcobalamin-dependent ribonucleoside-diphosphate reductase | SGRAN_RS19410 | Not Available | Negative | 4226348 - 4228573 | 79816.8 |
| hypothetical protein | SGRAN_RS19415 | Not Available | Positive | 4228755 - 4229168 | 14240.5 |
| lysr family transcriptional regulator | SGRAN_RS19420 | Not Available | Positive | 4229259 - 4229651 | 13933.8 |
| cytochrome-c peroxidase | SGRAN_RS19425 | Not Available | Negative | 4229646 - 4230620 | 35056.4 |
| hypothetical protein | SGRAN_RS19430 | Not Available | Negative | 4230617 - 4231123 | 16980.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.