Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
efflux rnd transporter periplasmic adaptor subunitSGRAN_RS19285Not AvailableNegative4201080 - 420213235416.6
rhodanese-like domain-containing proteinSGRAN_RS19290Not AvailableNegative4202161 - 420249911775.2
nad(p)/fad-dependent oxidoreductaseSGRAN_RS19295Not AvailablePositive4202581 - 420385846092.6
duf2892 domain-containing proteinSGRAN_RS19300Not AvailablePositive4203885 - 42040887096.96
tolc family proteinSGRAN_RS19305Not AvailablePositive4204088 - 420535043777.0
alginate export family proteinSGRAN_RS19310Not AvailablePositive4205430 - 420670746483.6
helix-turn-helix domain-containing proteinSGRAN_RS19315Not AvailableNegative4206824 - 420751625127.8
mfs transporterSGRAN_RS19320Not AvailablePositive4207726 - 421049199172.2
nitrate reductase subunit alphaSGRAN_RS19325Not AvailablePositive4210488 - 4214225139156.0
nitrate reductase subunit betaSGRAN_RS19330Not AvailablePositive4214222 - 421574857469.7

Displaying genes 3971 – 3980 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.