Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 4 protein | SGRAN_RS19080 | Not Available | Negative | 4151627 - 4153954 | 84743.1 |
| nnrs family protein | SGRAN_RS19085 | Not Available | Negative | 4154151 - 4155356 | 42298.1 |
| nitric-oxide reductase large subunit | SGRAN_RS19090 | Not Available | Negative | 4155353 - 4157602 | 83375.6 |
| hypothetical protein | SGRAN_RS19095 | Not Available | Negative | 4157635 - 4157988 | 12375.6 |
| crp/fnr family transcriptional regulator | SGRAN_RS19105 | Not Available | Negative | 4158339 - 4159040 | 25464.6 |
| hypothetical protein | SGRAN_RS19110 | Not Available | Positive | 4159232 - 4159678 | 15248.5 |
| hypothetical protein | SGRAN_RS19115 | Not Available | Positive | 4159675 - 4160160 | 18101.4 |
| phosphoenolpyruvate carboxykinase | SGRAN_RS19120 | Not Available | Negative | 4160168 - 4161769 | 57744.3 |
| response regulator transcription factor | SGRAN_RS19125 | Not Available | Positive | 4162020 - 4162730 | 26585.7 |
| atp-binding protein | SGRAN_RS19130 | Not Available | Positive | 4162735 - 4164348 | 59489.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.