Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dienelactone hydrolase family protein | SGRAN_RS18930 | Not Available | Negative | 4122093 - 4122782 | 25106.5 |
| f0f1 atp synthase subunit delta | SGRAN_RS18935 | Not Available | Positive | 4123050 - 4123616 | 19209.1 |
| f0f1 atp synthase subunit alpha | SGRAN_RS18940 | Not Available | Positive | 4123655 - 4125184 | 54919.1 |
| f0f1 atp synthase subunit gamma | SGRAN_RS18945 | Not Available | Positive | 4125261 - 4126136 | 31073.3 |
| f0f1 atp synthase subunit beta | SGRAN_RS18950 | Not Available | Positive | 4126151 - 4127692 | 53995.4 |
| atp synthase f1 subunit epsilon | SGRAN_RS18955 | Not Available | Positive | 4127801 - 4128058 | 8902.6 |
| cpaf family protein | SGRAN_RS18960 | Not Available | Positive | 4128738 - 4130231 | 54957.7 |
| hypothetical protein | SGRAN_RS18965 | Not Available | Negative | 4130489 - 4130674 | 6639.3 |
| class i sam-dependent methyltransferase | SGRAN_RS18970 | Not Available | Positive | 4130754 - 4131587 | 29422.7 |
| leucyl/phenylalanyl-trna--protein transferase | SGRAN_RS18975 | Not Available | Positive | 4131584 - 4132369 | 27063.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.