Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-mercaptopyruvate sulfurtransferase | SGRAN_RS18780 | Not Available | Negative | 4088604 - 4089446 | 30167.5 |
| hypothetical protein | SGRAN_RS18785 | Not Available | Negative | 4089624 - 4090985 | 45530.2 |
| preq(1) synthase | SGRAN_RS18790 | Not Available | Positive | 4091165 - 4091635 | 17265.6 |
| thioesterase family protein | SGRAN_RS18795 | Not Available | Positive | 4091705 - 4092115 | 15373.3 |
| cytochrome p450 | SGRAN_RS18800 | Not Available | Negative | 4092422 - 4093708 | 47904.3 |
| helicase hera-like domain-containing protein | SGRAN_RS18805 | Not Available | Negative | 4093773 - 4095368 | 56904.4 |
| voc family protein | SGRAN_RS18810 | Not Available | Negative | 4095524 - 4095892 | 12774.1 |
| trypsin-like peptidase domain-containing protein | SGRAN_RS18815 | Not Available | Negative | 4096013 - 4097512 | 51665.6 |
| protease modulator hflc | SGRAN_RS18820 | Not Available | Negative | 4097652 - 4098503 | 31987.6 |
| protease modulator hflk | SGRAN_RS18825 | Not Available | Negative | 4098503 - 4099603 | 40062.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.