Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysr family transcriptional regulatorSGRAN_RS18480Not AvailablePositive4027367 - 402829333453.3
sulfite exporter taue/safe family proteinSGRAN_RS18485Not AvailablePositive4028421 - 402918826516.7
hypothetical proteinSGRAN_RS18490Not AvailableNegative4029209 - 402976020124.9
beta-ketoacyl-acp synthase iiiSGRAN_RS18495Not AvailablePositive4029958 - 403109440606.2
imidazole glycerol phosphate synthase subunit hisfSGRAN_RS18500Not AvailableNegative4031081 - 403184525983.0
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseSGRAN_RS18505Not AvailableNegative4031964 - 403269825014.9
imidazole glycerol phosphate synthase subunit hishSGRAN_RS18510Not AvailableNegative4032686 - 403329420900.1
imidazoleglycerol-phosphate dehydratase hisbSGRAN_RS18515Not AvailableNegative4033304 - 403389121377.3
sspb family proteinSGRAN_RS18520Not AvailablePositive4033989 - 403447117717.7
hypothetical proteinSGRAN_RS18525Not AvailablePositive4034476 - 403478711661.6

Displaying genes 3811 – 3820 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.