Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SGRAN_RS18190 | Not Available | Negative | 3966045 - 3966590 | 19104.6 |
| tonb-dependent siderophore receptor | SGRAN_RS18195 | Not Available | Negative | 3966623 - 3968575 | 69822.5 |
| cobyrinate a,c-diamide synthase | SGRAN_RS18200 | Not Available | Negative | 3968924 - 3970225 | 44860.7 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | SGRAN_RS18205 | Not Available | Negative | 3970222 - 3970830 | 22324.1 |
| Trna-arg | Not Available | Not Available | Positive | 3971426 - 3971502 | Not Available |
| duf1178 family protein | SGRAN_RS18215 | Not Available | Negative | 3971551 - 3972024 | 16428.6 |
| glutaredoxin 3 | SGRAN_RS18220 | Not Available | Negative | 3972021 - 3972287 | 9363.28 |
| double zinc ribbon domain-containing protein | SGRAN_RS18225 | Not Available | Negative | 3972292 - 3973104 | 28553.8 |
| methyltransferase type 12 | SGRAN_RS18230 | Not Available | Positive | 3973216 - 3974082 | 30325.8 |
| (deoxy)nucleoside triphosphate pyrophosphohydrolase | SGRAN_RS18235 | Not Available | Negative | 3974674 - 3975066 | 14109.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.