Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSGRAN_RS18140Not AvailableNegative3959915 - 39601307642.09
hypothetical proteinSGRAN_RS22385Not AvailablePositive3960182 - 396054112054.2
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferaseSGRAN_RS18150Not AvailableNegative3960711 - 396122318406.9
hypothetical proteinSGRAN_RS18155Not AvailableNegative3961220 - 39614296939.2
adenosylcobinamide-phosphate synthase cbibSGRAN_RS18160Not AvailableNegative3961429 - 396236733118.3
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeSGRAN_RS18165Not AvailableNegative3962360 - 396334034431.4
adenosylcobinamide-gdp ribazoletransferaseSGRAN_RS18170Not AvailableNegative3963337 - 396405925211.3
histidine phosphatase family proteinSGRAN_RS18175Not AvailableNegative3964056 - 396462520438.6
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferaseSGRAN_RS18180Not AvailableNegative3964622 - 396563834245.1
duf1636 domain-containing proteinSGRAN_RS18185Not AvailableNegative3965635 - 396604214555.4

Displaying genes 3741 – 3750 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.