Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SGRAN_RS18000 | Not Available | Negative | 3931091 - 3931345 | 8823.71 |
| hypothetical protein | SGRAN_RS18005 | Not Available | Negative | 3931372 - 3931635 | 9817.78 |
| hypothetical protein | SGRAN_RS18010 | Not Available | Negative | 3931681 - 3931929 | 9400.47 |
| hypothetical protein | SGRAN_RS18015 | Not Available | Negative | 3931940 - 3932260 | 11629.2 |
| hypothetical protein | SGRAN_RS18020 | Not Available | Negative | 3932272 - 3932571 | 11052.2 |
| envelope stress response membrane protein pspc | SGRAN_RS18025 | Not Available | Negative | 3932600 - 3932980 | 14399.3 |
| envelope stress response membrane protein pspb | SGRAN_RS18030 | Not Available | Negative | 3932982 - 3933257 | 10710.9 |
| phage shock protein pspa | SGRAN_RS18035 | Not Available | Negative | 3933270 - 3933932 | 24718.4 |
| hypothetical protein | SGRAN_RS22695 | Not Available | Negative | 3934039 - 3934209 | 5403.67 |
| phage shock protein operon transcriptional activator | SGRAN_RS18040 | Not Available | Positive | 3934386 - 3935414 | 37561.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.