Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l29 | SGRAN_RS01545 | Not Available | Positive | 323587 - 323793 | 7662.14 |
| 30s ribosomal protein s17 | SGRAN_RS01550 | Not Available | Positive | 323804 - 324097 | 10808.1 |
| 50s ribosomal protein l14 | SGRAN_RS01555 | Not Available | Positive | 324155 - 324523 | 13276.4 |
| 50s ribosomal protein l24 | SGRAN_RS01560 | Not Available | Positive | 324526 - 324846 | 11240.8 |
| 50s ribosomal protein l5 | SGRAN_RS01565 | Not Available | Positive | 324839 - 325417 | 21809.8 |
| 30s ribosomal protein s14 | SGRAN_RS01570 | Not Available | Positive | 325468 - 325773 | 11658.4 |
| 30s ribosomal protein s8 | SGRAN_RS01575 | Not Available | Positive | 325786 - 326190 | 14708.9 |
| 50s ribosomal protein l6 | SGRAN_RS01580 | Not Available | Positive | 326190 - 326723 | 19353.3 |
| 50s ribosomal protein l18 | SGRAN_RS01585 | Not Available | Positive | 326727 - 327080 | 12575.2 |
| 30s ribosomal protein s5 | SGRAN_RS01590 | Not Available | Positive | 327083 - 327775 | 24028.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.