Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-keto-4-pentenoate hydrataseSGRAN_RS17850Not AvailableNegative3894268 - 389504726705.1
2-hydroxymuconic semialdehyde dehydrogenaseSGRAN_RS17855Not AvailableNegative3895057 - 389652952073.0
alpha/beta fold hydrolaseSGRAN_RS17860Not AvailableNegative3896526 - 389735328757.3
abc transporter atp-binding proteinSGRAN_RS17865Not AvailableNegative3897353 - 389813227716.8
abc transporter permeaseSGRAN_RS17870Not AvailableNegative3898099 - 389885427053.7
voc family proteinSGRAN_RS17875Not AvailableNegative3898851 - 389940820870.6
abc transporter substrate-binding proteinSGRAN_RS17880Not AvailableNegative3899405 - 390045737774.7
fumarylacetoacetate hydrolase family proteinSGRAN_RS17885Not AvailableNegative3900454 - 390136832687.8
sulfite exporter taue/safe family proteinSGRAN_RS17890Not AvailableNegative3901498 - 390232527728.4
aspartate dehydrogenaseSGRAN_RS17895Not AvailablePositive3902659 - 390346227828.8

Displaying genes 3681 – 3690 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.