Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycerol-3-phosphate 1-o-acyltransferaseSGRAN_RS17800Not AvailableNegative3880302 - 388265686155.2
had-ib family hydrolaseSGRAN_RS17805Not AvailableNegative3882784 - 388433456445.1
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseSGRAN_RS17810Not AvailableNegative3884441 - 388506120385.2
phosphogluconate dehydrataseSGRAN_RS17815Not AvailableNegative3885197 - 388703864519.6
glucose-6-phosphate dehydrogenaseSGRAN_RS17820Not AvailableNegative3887234 - 388870953804.4
glycerol-3-phosphate dehydrogenaseSGRAN_RS17825Not AvailablePositive3889062 - 389058855745.4
alkyl hydroperoxide reductase subunit fSGRAN_RS17830Not AvailableNegative3890670 - 389225356594.8
alkyl hydroperoxide reductase subunit cSGRAN_RS17835Not AvailableNegative3892389 - 389295220876.8
3-hydroxyanthranilate 3,4-dioxygenaseSGRAN_RS17840Not AvailableNegative3893277 - 389381920509.2
rida family proteinSGRAN_RS17845Not AvailableNegative3893825 - 389427115601.2

Displaying genes 3671 – 3680 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.