Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | SGRAN_RS17710 | Not Available | Negative | 3858412 - 3859794 | 47439.3 |
| tonb-dependent receptor | SGRAN_RS17715 | Not Available | Negative | 3859799 - 3862018 | 80649.5 |
| dipeptidase | SGRAN_RS17720 | Not Available | Negative | 3862348 - 3863472 | 39831.5 |
| amidohydrolase family protein | SGRAN_RS17725 | Not Available | Negative | 3863462 - 3864841 | 48523.6 |
| gnat family n-acetyltransferase | SGRAN_RS17730 | Not Available | Negative | 3864892 - 3865506 | 21832.2 |
| translation elongation factor 4 | SGRAN_RS17735 | Not Available | Negative | 3865569 - 3867392 | 67016.9 |
| transposase | SGRAN_RS17740 | Not Available | Negative | 3867483 - 3868391 | 33362.2 |
| heat repeat domain-containing protein | SGRAN_RS17745 | Not Available | Negative | 3868466 - 3869470 | 35101.2 |
| hypothetical protein | SGRAN_RS22690 | Not Available | Negative | 3869549 - 3869695 | 4983.07 |
| bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase | SGRAN_RS17750 | Not Available | Negative | 3869790 - 3870557 | 26224.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.