Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| double-strand break repair protein addb | SGRAN_RS17410 | Not Available | Negative | 3789998 - 3792964 | 104618.0 |
| nucleotidyltransferase family protein | SGRAN_RS17415 | Not Available | Negative | 3793053 - 3793772 | 25623.0 |
| phosphotransferase | SGRAN_RS17420 | Not Available | Negative | 3793769 - 3794770 | 36735.9 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | SGRAN_RS17425 | Not Available | Negative | 3794767 - 3795216 | 15924.1 |
| pas domain-containing sensor histidine kinase | SGRAN_RS17430 | Not Available | Negative | 3795562 - 3797925 | 84668.0 |
| adenosylhomocysteinase | SGRAN_RS17435 | Not Available | Negative | 3798384 - 3799793 | 50445.5 |
| hypothetical protein | SGRAN_RS17440 | Not Available | Positive | 3800278 - 3800676 | 13697.5 |
| yqge/algh family protein | SGRAN_RS17445 | Not Available | Negative | 3800681 - 3801244 | 19931.5 |
| peroxiredoxin | SGRAN_RS17450 | Not Available | Positive | 3801659 - 3802138 | 16781.9 |
| amp nucleosidase | SGRAN_RS17455 | Not Available | Positive | 3802212 - 3803699 | 54037.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.