Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor tu | SGRAN_RS01495 | Not Available | Positive | 317270 - 318460 | 42865.4 |
| 30s ribosomal protein s10 | SGRAN_RS01500 | Not Available | Positive | 318607 - 318918 | 11691.3 |
| 50s ribosomal protein l3 | SGRAN_RS01505 | Not Available | Positive | 319223 - 319981 | 26586.7 |
| 50s ribosomal protein l4 | SGRAN_RS01510 | Not Available | Positive | 319984 - 320610 | 22121.9 |
| 50s ribosomal protein l23 | SGRAN_RS01515 | Not Available | Positive | 320603 - 320911 | 11070.5 |
| 50s ribosomal protein l2 | SGRAN_RS01520 | Not Available | Positive | 320934 - 321770 | 30388.9 |
| 30s ribosomal protein s19 | SGRAN_RS01525 | Not Available | Positive | 321774 - 322049 | 10079.2 |
| 50s ribosomal protein l22 | SGRAN_RS01530 | Not Available | Positive | 322049 - 322429 | 13965.0 |
| 30s ribosomal protein s3 | SGRAN_RS01535 | Not Available | Positive | 322431 - 323138 | 26340.2 |
| 50s ribosomal protein l16 | SGRAN_RS01540 | Not Available | Positive | 323150 - 323581 | 15746.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.