Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i methionyl aminopeptidase | SGRAN_RS17360 | Not Available | Positive | 3775230 - 3776069 | 30133.1 |
| pqq-dependent dehydrogenase, methanol/ethanol family | SGRAN_RS17365 | Not Available | Positive | 3776343 - 3778520 | 77495.2 |
| p-ii family nitrogen regulator | SGRAN_RS17370 | Not Available | Positive | 3778990 - 3779328 | 12236.8 |
| type i glutamate--ammonia ligase | SGRAN_RS17375 | Not Available | Positive | 3779395 - 3780807 | 51856.4 |
| hypothetical protein | SGRAN_RS17380 | Not Available | Positive | 3780961 - 3781479 | 18774.7 |
| m20/m25/m40 family metallo-hydrolase | SGRAN_RS17385 | Not Available | Positive | 3781563 - 3782873 | 45763.9 |
| aldehyde dehydrogenase family protein | SGRAN_RS17390 | Not Available | Positive | 3782969 - 3784405 | 49682.4 |
| bifunctional glutamate n-acetyltransferase/amino-acid acetyltransferase argj | SGRAN_RS17395 | Not Available | Positive | 3784698 - 3785924 | 42487.1 |
| thioredoxin trxa | SGRAN_RS17400 | Not Available | Negative | 3786171 - 3786491 | 11211.5 |
| double-strand break repair helicase adda | SGRAN_RS17405 | Not Available | Negative | 3786555 - 3789998 | 123000.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.