Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aminotransferase class v-fold plp-dependent enzymeSGRAN_RS17170Not AvailablePositive3730677 - 373180439364.6
amidohydrolase family proteinSGRAN_RS17175Not AvailableNegative3731808 - 373355663146.0
alkylphosphonate utilization proteinSGRAN_RS17180Not AvailablePositive3733827 - 373413811087.0
acyl-coa dehydrogenase family proteinSGRAN_RS17185Not AvailableNegative3734259 - 373555449018.0
phosphotransferase family proteinSGRAN_RS17190Not AvailableNegative3735696 - 373702747627.3
enoyl-coa hydrataseSGRAN_RS17195Not AvailableNegative3737081 - 373786327037.5
electron transfer flavoprotein subunit alpha/fixb family proteinSGRAN_RS17200Not AvailableNegative3737936 - 373886531393.5
electron transfer flavoprotein subunit beta/fixa family proteinSGRAN_RS17205Not AvailableNegative3738894 - 373964326455.2
adp-forming succinate--coa ligase subunit betaSGRAN_RS17210Not AvailableNegative3739880 - 374108842123.1
hypothetical proteinSGRAN_RS17215Not AvailableNegative3741214 - 374152811153.8

Displaying genes 3541 – 3550 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.