Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1971 domain-containing protein | SGRAN_RS22675 | Not Available | Positive | 3707661 - 3707972 | 10870.1 |
| wax ester/triacylglycerol synthase family o-acyltransferase | SGRAN_RS17075 | Not Available | Positive | 3708036 - 3709460 | 52642.8 |
| 30s ribosome-binding factor rbfa | SGRAN_RS17080 | Not Available | Negative | 3709482 - 3709883 | 15012.9 |
| paai family thioesterase | SGRAN_RS17085 | Not Available | Negative | 3709873 - 3710292 | 14859.0 |
| translation initiation factor if-2 | SGRAN_RS17090 | Not Available | Negative | 3710305 - 3712839 | 91133.0 |
| duf448 domain-containing protein | SGRAN_RS17095 | Not Available | Negative | 3712857 - 3713615 | 26846.8 |
| transcription termination factor nusa | SGRAN_RS17100 | Not Available | Negative | 3713596 - 3715236 | 60295.4 |
| ribosome maturation protein rimp | SGRAN_RS17105 | Not Available | Negative | 3715236 - 3715781 | 19777.2 |
| cdf family co(ii)/ni(ii) efflux transporter dmef | SGRAN_RS17110 | Not Available | Positive | 3716104 - 3717042 | 33097.6 |
| gamma-glutamyltransferase family protein | SGRAN_RS17115 | Not Available | Positive | 3717122 - 3718948 | 65530.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.