Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdenum abc transporter atp-binding protein | SGRAN_RS16970 | Not Available | Negative | 3689233 - 3689853 | 22456.2 |
| molybdate abc transporter permease subunit | SGRAN_RS16975 | Not Available | Negative | 3689843 - 3690538 | 24794.2 |
| molybdate abc transporter substrate-binding protein | SGRAN_RS16980 | Not Available | Negative | 3690538 - 3691302 | 26226.3 |
| crp/fnr family transcriptional regulator | SGRAN_RS16985 | Not Available | Negative | 3691321 - 3691953 | 22478.2 |
| sterol desaturase family protein | SGRAN_RS16990 | Not Available | Negative | 3692032 - 3693195 | 44419.0 |
| nad-dependent dna ligase liga | SGRAN_RS16995 | Not Available | Negative | 3693307 - 3695472 | 78531.5 |
| putative quinol monooxygenase | SGRAN_RS17000 | Not Available | Negative | 3695469 - 3695777 | 10796.9 |
| gnat family n-acetyltransferase | SGRAN_RS17005 | Not Available | Negative | 3695864 - 3696511 | 22985.8 |
| dna repair protein recn | SGRAN_RS17010 | Not Available | Negative | 3696598 - 3698277 | 58239.4 |
| outer membrane protein assembly factor bamd | SGRAN_RS17015 | Not Available | Negative | 3698568 - 3699362 | 29954.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.