Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
m14-type cytosolic carboxypeptidaseSGRAN_RS01445Not AvailablePositive306857 - 30797841204.3
hsp20 family proteinSGRAN_RS01450Not AvailableNegative308058 - 30851917252.4
2,3-diphosphoglycerate-dependent phosphoglycerate mutaseSGRAN_RS01455Not AvailablePositive308711 - 30939725114.9
tonb-dependent receptorSGRAN_RS01460Not AvailableNegative309426 - 31151975980.0
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseSGRAN_RS01465Not AvailableNegative311654 - 31249628965.7
pyrimidine 5'-nucleotidaseSGRAN_RS01470Not AvailableNegative312493 - 31318225297.1
dna-deoxyinosine glycosylaseSGRAN_RS01475Not AvailableNegative313193 - 31370818381.3
30s ribosomal protein s12SGRAN_RS01480Not AvailablePositive314035 - 31440613863.1
30s ribosomal protein s7SGRAN_RS01485Not AvailablePositive314482 - 31495217753.4
elongation factor gSGRAN_RS01490Not AvailablePositive315076 - 31714876096.6

Displaying genes 341 – 350 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.