Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family acid phosphatase | SGRAN_RS16870 | Not Available | Positive | 3671508 - 3672404 | 31187.0 |
| 3-oxoacid coa-transferase subunit b | SGRAN_RS16875 | Not Available | Positive | 3672404 - 3673060 | 23219.0 |
| copper resistance protein copc | SGRAN_RS16880 | Not Available | Positive | 3673287 - 3674144 | 30695.5 |
| 3-isopropylmalate dehydratase large subunit | SGRAN_RS16885 | Not Available | Positive | 3674937 - 3676367 | 50042.9 |
| 3-isopropylmalate dehydratase small subunit | SGRAN_RS16890 | Not Available | Positive | 3676364 - 3676966 | 21932.1 |
| nadph:quinone oxidoreductase family protein | SGRAN_RS16895 | Not Available | Positive | 3676992 - 3677987 | 34494.5 |
| duf167 domain-containing protein | SGRAN_RS16900 | Not Available | Positive | 3678056 - 3678265 | 7223.9 |
| hypothetical protein | SGRAN_RS16905 | Not Available | Positive | 3678366 - 3678659 | 11201.7 |
| type ii toxin-antitoxin system pard family antitoxin | SGRAN_RS16910 | Not Available | Positive | 3678714 - 3678965 | 9516.17 |
| type ii toxin-antitoxin system rele/pare family toxin | SGRAN_RS16915 | Not Available | Positive | 3678958 - 3679254 | 11404.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.