Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m20/m25/m40 family metallo-hydrolase | SGRAN_RS16770 | Not Available | Positive | 3651608 - 3653020 | 50587.1 |
| pyridoxamine 5'-phosphate oxidase family protein | SGRAN_RS16775 | Not Available | Positive | 3653106 - 3654107 | 34721.6 |
| dna topoisomerase iv subunit a | SGRAN_RS16780 | Not Available | Positive | 3654164 - 3656464 | 83995.0 |
| eal domain-containing protein | SGRAN_RS16785 | Not Available | Positive | 3656554 - 3658230 | 61318.2 |
| cca trna nucleotidyltransferase | SGRAN_RS16790 | Not Available | Negative | 3658194 - 3659405 | 43215.8 |
| coa pyrophosphatase | SGRAN_RS16795 | Not Available | Negative | 3659402 - 3659992 | 22130.1 |
| duf1285 domain-containing protein | SGRAN_RS16800 | Not Available | Negative | 3659992 - 3660603 | 22027.2 |
| gnat family n-acetyltransferase | SGRAN_RS16805 | Not Available | Negative | 3660701 - 3661204 | 18057.9 |
| dihydroneopterin aldolase | SGRAN_RS16810 | Not Available | Positive | 3661294 - 3661665 | 13778.7 |
| sdr family oxidoreductase | SGRAN_RS16815 | Not Available | Positive | 3661662 - 3662429 | 26639.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.