Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSGRAN_RS16570Not AvailableNegative3608980 - 361108874260.8
sulfotransferaseSGRAN_RS16575Not AvailableNegative3611085 - 361248850614.2
tonb-dependent receptorSGRAN_RS16580Not AvailableNegative3612494 - 361485485798.4
carbon-nitrogen hydrolase family proteinSGRAN_RS16585Not AvailableNegative3614851 - 361576832808.1
plp-dependent aminotransferase family proteinSGRAN_RS16590Not AvailableNegative3615854 - 361765966424.7
guanitoxin biosynthesis heme-dependent pre-guanitoxin n-hydroxylase gntaSGRAN_RS16595Not AvailablePositive3617806 - 361849826092.6
duf1989 domain-containing proteinSGRAN_RS16600Not AvailablePositive3618495 - 361909121499.5
pyridoxal phosphate-dependent aminotransferaseSGRAN_RS16605Not AvailablePositive3619582 - 362075442163.3
urocanate hydrataseSGRAN_RS16610Not AvailableNegative3620772 - 362243660351.8
n-formylglutamate deformylaseSGRAN_RS16615Not AvailableNegative3622433 - 362324529132.4

Displaying genes 3421 – 3430 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.