Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | SGRAN_RS16480 | Not Available | Negative | 3593176 - 3593775 | 21863.4 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | SGRAN_RS16485 | Not Available | Positive | 3594028 - 3595185 | 43936.6 |
| gfo/idh/moca family protein | SGRAN_RS16490 | Not Available | Positive | 3595208 - 3596272 | 36090.3 |
| nuclear transport factor 2 family protein | SGRAN_RS16495 | Not Available | Positive | 3596286 - 3596855 | 21583.4 |
| llm class flavin-dependent oxidoreductase | SGRAN_RS16500 | Not Available | Positive | 3596977 - 3598056 | 40335.8 |
| cytochrome p450 | SGRAN_RS16505 | Not Available | Positive | 3598149 - 3599405 | 46897.3 |
| nadph:quinone oxidoreductase family protein | SGRAN_RS16510 | Not Available | Positive | 3599464 - 3600450 | 33986.9 |
| nuclear transport factor 2 family protein | SGRAN_RS16515 | Not Available | Positive | 3600469 - 3600990 | 20075.8 |
| voc family protein | SGRAN_RS16520 | Not Available | Positive | 3601015 - 3601509 | 17900.2 |
| alpha/beta hydrolase | SGRAN_RS16525 | Not Available | Positive | 3601522 - 3602277 | 26486.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.