Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | SGRAN_RS16430 | Not Available | Negative | 3580279 - 3580908 | 22311.8 |
| acyl-coa dehydrogenase family protein | SGRAN_RS16435 | Not Available | Negative | 3580908 - 3582053 | 42591.8 |
| class i adenylate-forming enzyme family protein | SGRAN_RS16440 | Not Available | Positive | 3582155 - 3583849 | 61622.8 |
| enoyl-coa hydratase/isomerase family protein | SGRAN_RS16445 | Not Available | Negative | 3583900 - 3584679 | 28133.7 |
| glucose 1-dehydrogenase | SGRAN_RS16450 | Not Available | Negative | 3584731 - 3585477 | 25445.6 |
| tonb-dependent receptor | SGRAN_RS16455 | Not Available | Positive | 3585791 - 3588262 | 87960.4 |
| mfs transporter | SGRAN_RS16460 | Not Available | Positive | 3588370 - 3589986 | 57000.8 |
| thioesterase family protein | SGRAN_RS16465 | Not Available | Positive | 3589983 - 3590411 | 15660.6 |
| class i adenylate-forming enzyme family protein | SGRAN_RS16470 | Not Available | Positive | 3590408 - 3592078 | 59599.6 |
| zinc-binding dehydrogenase | SGRAN_RS16475 | Not Available | Positive | 3592063 - 3593142 | 37923.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.