Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate, water dikinase regulatory protein | SGRAN_RS01395 | Not Available | Positive | 299907 - 300725 | 30158.0 |
| maf family protein | SGRAN_RS01400 | Not Available | Positive | 300722 - 301321 | 21144.5 |
| shikimate dehydrogenase | SGRAN_RS01405 | Not Available | Positive | 301318 - 302145 | 28520.6 |
| dephospho-coa kinase | SGRAN_RS01410 | Not Available | Positive | 302142 - 302765 | 22916.2 |
| dna polymerase iii subunit epsilon | SGRAN_RS01415 | Not Available | Positive | 302786 - 303478 | 25445.6 |
| ribosome hibernation-promoting factor, hpf/yfia family | SGRAN_RS01420 | Not Available | Positive | 303523 - 304095 | 21020.8 |
| pts sugar transporter subunit iia | SGRAN_RS01425 | Not Available | Positive | 304245 - 304709 | 16492.9 |
| duf1491 family protein | SGRAN_RS01430 | Not Available | Positive | 304833 - 305216 | 13984.7 |
| cell wall hydrolase | SGRAN_RS01435 | Not Available | Positive | 305412 - 306059 | 22694.0 |
| duf4136 domain-containing protein | SGRAN_RS01440 | Not Available | Positive | 306234 - 306860 | 20883.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.