Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tetr/acrr family transcriptional regulatorSGRAN_RS16380Not AvailableNegative3571041 - 357170325140.1
caib/baif coa-transferase family proteinSGRAN_RS16385Not AvailableNegative3571996 - 357316540276.3
metal-sulfur cluster assembly factorSGRAN_RS16390Not AvailableNegative3573162 - 357347311305.8
amidohydrolase family proteinSGRAN_RS16395Not AvailableNegative3573470 - 357453139640.3
enoyl-coa hydratase/isomerase family proteinSGRAN_RS16400Not AvailableNegative3574535 - 357533528578.3
thiolase family proteinSGRAN_RS16405Not AvailableNegative3575347 - 357651640537.4
class i adenylate-forming enzyme family proteinSGRAN_RS16410Not AvailableNegative3576513 - 357809956454.6
zn-ribbon domain-containing ob-fold proteinSGRAN_RS16415Not AvailableNegative3578096 - 357850014629.3
thiolase family proteinSGRAN_RS16420Not AvailableNegative3578503 - 357972942964.5
maoc/paaz c-terminal domain-containing proteinSGRAN_RS16425Not AvailableNegative3579734 - 358020717039.2

Displaying genes 3381 – 3390 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.