Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | SGRAN_RS16330 | Not Available | Negative | 3559446 - 3559907 | 17386.7 |
| tonb-dependent receptor | SGRAN_RS16335 | Not Available | Negative | 3559974 - 3562331 | 84858.8 |
| nuclear transport factor 2 family protein | SGRAN_RS16340 | Not Available | Negative | 3562454 - 3562966 | 19079.3 |
| carboxymuconolactone decarboxylase family protein | SGRAN_RS16345 | Not Available | Positive | 3563069 - 3563716 | 23144.0 |
| sdr family oxidoreductase | SGRAN_RS16350 | Not Available | Negative | 3563717 - 3564544 | 28046.6 |
| cytochrome p450 | SGRAN_RS16355 | Not Available | Negative | 3564529 - 3565776 | 46541.1 |
| zinc-binding dehydrogenase | SGRAN_RS16360 | Not Available | Negative | 3565792 - 3566877 | 37824.6 |
| llm class flavin-dependent oxidoreductase | SGRAN_RS16365 | Not Available | Negative | 3566931 - 3568031 | 41300.4 |
| llm class flavin-dependent oxidoreductase | SGRAN_RS16370 | Not Available | Negative | 3568072 - 3569226 | 43314.1 |
| class i adenylate-forming enzyme family protein | SGRAN_RS16375 | Not Available | Positive | 3569397 - 3571025 | 58612.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.