Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sdr family nad(p)-dependent oxidoreductaseSGRAN_RS16280Not AvailableNegative3551405 - 355216625731.2
2fe-2s iron-sulfur cluster-binding proteinSGRAN_RS16285Not AvailableNegative3552271 - 355258811285.2
fad-dependent oxidoreductaseSGRAN_RS16290Not AvailableNegative3552607 - 355383943546.4
llm class flavin-dependent oxidoreductaseSGRAN_RS16295Not AvailableNegative3553871 - 355499241874.8
tetr/acrr family transcriptional regulatorSGRAN_RS16300Not AvailablePositive3555133 - 355578623760.9
nuclear transport factor 2 family proteinSGRAN_RS16305Not AvailableNegative3555791 - 355619814998.8
3,4-dihydroxy-2-butanone-4-phosphate synthaseSGRAN_RS16310Not AvailableNegative3556191 - 355730039842.4
flavin reductase family proteinSGRAN_RS16315Not AvailableNegative3557305 - 355780517724.2
enoyl-coa hydratase/isomerase family proteinSGRAN_RS16320Not AvailableNegative3557817 - 355858727143.7
enoyl-coa hydratase-related proteinSGRAN_RS16325Not AvailableNegative3558589 - 355944930843.9

Displaying genes 3361 – 3370 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.