Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf736 domain-containing protein | SGRAN_RS16050 | Not Available | Negative | 3499420 - 3499737 | 11547.6 |
| hypothetical protein | SGRAN_RS16055 | Not Available | Negative | 3500055 - 3500501 | 15098.9 |
| hypothetical protein | SGRAN_RS22650 | Not Available | Negative | 3500628 - 3500792 | 6035.31 |
| hypothetical protein | SGRAN_RS16060 | Not Available | Positive | 3500983 - 3501675 | 26200.2 |
| duf736 family protein | SGRAN_RS16065 | Not Available | Negative | 3501696 - 3502013 | 11043.1 |
| hypothetical protein | SGRAN_RS16070 | Not Available | Negative | 3502309 - 3504747 | 91597.0 |
| hypothetical protein | SGRAN_RS16075 | Not Available | Negative | 3504744 - 3505604 | 31731.4 |
| hypothetical protein | SGRAN_RS22855 | Not Available | Positive | 3506000 - 3506773 | 28328.2 |
| error-prone dna polymerase | SGRAN_RS16085 | Not Available | Negative | 3506850 - 3510059 | 118652.0 |
| duf6504 family protein | SGRAN_RS16090 | Not Available | Negative | 3510056 - 3511849 | 64719.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.