Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dienelactone hydrolase family proteinSGRAN_RS01345Not AvailablePositive291101 - 29179925101.5
nuclear transport factor 2 family proteinSGRAN_RS01350Not AvailablePositive291796 - 29219414479.3
fmn-binding glutamate synthase family proteinSGRAN_RS01355Not AvailablePositive292210 - 29380257785.2
duf1489 domain-containing proteinSGRAN_RS01360Not AvailableNegative294024 - 29441014323.2
hypothetical proteinSGRAN_RS01365Not AvailableNegative294407 - 29496719456.8
terc family proteinSGRAN_RS01370Not AvailableNegative295425 - 29614725066.3
antibiotic biosynthesis monooxygenaseSGRAN_RS01375Not AvailableNegative296150 - 29644310832.9
transcription termination factor rhoSGRAN_RS01380Not AvailableNegative296453 - 29770946467.9
copd family proteinSGRAN_RS01385Not AvailableNegative298089 - 29853817311.9
uroporphyrinogen decarboxylaseSGRAN_RS01390Not AvailableNegative298543 - 29957136423.8

Displaying genes 321 – 330 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.