Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | SGRAN_RS15850 | Not Available | Negative | 3462038 - 3463435 | 50259.1 |
| vwa domain-containing protein | SGRAN_RS15855 | Not Available | Positive | 3463747 - 3464925 | 45369.2 |
| lipid ii flippase amj family protein | SGRAN_RS15860 | Not Available | Positive | 3465095 - 3465901 | 28424.5 |
| duf817 domain-containing protein | SGRAN_RS15865 | Not Available | Positive | 3465894 - 3466748 | 32642.4 |
| xaa-pro peptidase family protein | SGRAN_RS15870 | Not Available | Negative | 3466822 - 3468072 | 44160.9 |
| exo-beta-n-acetylmuramidase namz domain-containing protein | SGRAN_RS15875 | Not Available | Negative | 3468086 - 3469291 | 44187.0 |
| domon-like domain-containing protein | SGRAN_RS15880 | Not Available | Negative | 3469288 - 3469845 | 20688.0 |
| tyrosine--trna ligase | SGRAN_RS15885 | Not Available | Positive | 3469878 - 3471104 | 44945.1 |
| pilz domain-containing protein | SGRAN_RS15890 | Not Available | Positive | 3471195 - 3471536 | 12631.5 |
| iron-containing alcohol dehydrogenase | SGRAN_RS15895 | Not Available | Negative | 3471554 - 3472729 | 41612.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.